PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.01B4C
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 191aa    MW: 21773.9 Da    PI: 7.7776
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.01B4CgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH382.9e-125093654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  Aradu.01B4C 50 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 93
                 589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.4914493IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.37E-1647107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.8E-105093IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-125099IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.67E-45193No hitNo description
Gene3DG3DSA:4.10.280.101.9E-1651107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048738.87E-5142183No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MLVEEELQSL EMQRECKMEA SQSSSPPVFN SERKNNNRSK KVEGQPSKNL MAERRRRKRL  60
NDRLSMLRSI VPKISKMDRT SILGDTIDYM KELLDKINTL KQEIQVVDDS NGILSNDKHP  120
NDILVRNSPK FDVERRNNNG DTRVEICCGG KPGMLLSTVN TLEALGLDIQ HCVISCFNDF  180
TMQASCSEIQ L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15259ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015933105.11e-135PREDICTED: transcription factor bHLH93-like
SwissprotQ9LSL14e-67BH093_ARATH; Transcription factor bHLH93
TrEMBLV7B5W42e-87V7B5W4_PHAVU; Uncharacterized protein
STRINGGLYMA14G36370.19e-84(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-64beta HLH protein 93